In Silico Study of Pulutan (Urena lobata) Leaf Extract as Anti Inflammation and their ADME Prediction
DOI:
https://doi.org/10.30872/j.trop.pharm.chem.v6i1.219Keywords:
inflammation, enzymeAbstract
Inflammation is the basic for the pathogenesis of several diseases both of degenerative and non-degenerative disease. Urena lobata is a medicinal plant that can be found in Indonesia and has been used traditionally to cure influenza, inflammation and fever. However, there have been few reports about their anti-inflammatory activity and their mechanism action are still unclear. The aim of study to evaluate the anti-inflammatory activities of active substances from U.lobata leaf and their pharmacokinetic property through in silico study. lobata leaf was extracted by digeration methods using ethanol solvent. Therefore, the active substances in the extract was analyzed by Liquid Chromatography-Mass Spectra (LC-MS). Pharmacokinetic property and physicochemical of active compounds were evaluated using pkCSM online tool. Anti-inflammatory activity of U. lobata active compound on phospholipase-A2 (PLA-2), cyclooxygenase-2 (COX-2) and lipoxygenase-5 (LOX-5) were evaluated by in silico study. Ethanolic extract of U. lobata contained five active compound, there are stigmasterol, ?-sitosterol mangiferin, gossypetin and chrysoeriol. Molecular docking study indicated stigmasterol and ?-sitosterol of U. lobata have a strong activity as anti-inflammatory based on the estimation of inhibition constant (Ki) value against PLA2 and COX-2. Meanwhile, mangiferin and gossypetin have a stronger anti-inflammatory effect on LOX-5 among others compound. U. lobata has anti-inflammatory activity through inhibition on COX-2 greater than on PLA2 and LOX-5.
References
Linlin C, Huidan D, Hengmin C, Jin F, Zhicau Z, Junliang D, Yinlung L, Xun W, Lin Z. inflammatory responses and inflammation associated disease in organs. Oncotarget. 2018; 9(6): 7204–7218
Charles N. Serhan, Peter A. Ward, Derek W. Gilroy. Fundamentals of Inflammation. Food science and Technology. Yale J Biol Med. 2011; 84(1): 64–65
Sam H, Waheed A, Fakhreddin J. Adverse Effects of Nonsteroidal Anti-inflammatory Drugs: An Update of Gastrointestinal, Cardiovascular and Renal Complications. J Pharm Pharm Sci. 2013; 16(5) 821 - 847,
Muhammad T.I and Mohammad A.U. A revision on Urena lobata L. International Journal of Medicine, 2017; 5(1):126-131.
Babu, S. S., D. B. Madhuri, and S. L. Ali. “a Pharmacological review of Urena lobata plant”. Asian Journal of Pharmaceutical and Clinical Research, Vol. 9, no. 2, Mar. 2016, pp. 20-22.
Adewale AO, David AA, Abiodun OO. Studies on antimicrobial, antioxidant and phytochemical analysis of Urena lobata leave extract. J Phys Nat Sci 2007;1(2):12 20
Li, J., Zhou, N., Luo, K., Zhang, W., Li, X., Wu, C. & Bao, J., In Silico Discovery of Potential VEGFR-2 Inhibitors from Natural Derivatives for Anti-angiogenesis Therapy, Int. J. Mol. Sci., 15(9), pp. 15994-16011, 2014. DOI:10.3390/ijms150915994
Somer Jr., F.L., Molecular Modelling for Beginners (Alan Hinchliffe), J. Chem. Educ., 81(11), pp. 1573, 2004. DOI:10.1021/ed081p1573
Tsaioun, K., Blaauboer, B.J. & Hartung, T., Evidence-based Absorption, Distribution, Metabolism, Excretion (ADME) and its Interplay with Alternative Toxicity Methods, ALTEX, 33(4), pp. 343-358, 2016. DOI:10.14573/altex.1610101
Moroy, G., Martiny, V.Y., Vayer, P., Villoutreix, B.O. & Miteva, M.A., Toward in Silico Structure-based ADMET Prediction in Drug Discovery, Drug Discov. Today, 17(1–2), pp. 44–55, 2012. DOI: 10.1016/j.drudis. 2011.10.023
National Cancer Institute, Online SMILES Translator, United States https://cactus.nci.nih.gov/translate/, (20 December 2020).
Pires, D.E.V., Blundell, T.L. & Ascher, D.B., The University of Melbourne’s pkCSM Small-molecule Pharmacokinetics Prediction, http://biosig.unimelb.edu.au/pkcsm/ prediction/, (20 December 2020).
Kanimozhi D, Ratha bai V. Evaluation of phytochemical antioxidant, antimicrobial activity determination of bioactive components of ethanolic extract of aerial and underground parts of Cynodondactylon L. Int J Sci Res Rev 2012; 1(2): 33-48.
Chen JH, Tsai CW, Wang CP, Lin HH. Anti-atherosclerotic potential of gossypetin via inhibiting LDL oxidation and foam cell formation. Toxicol Appl Pharmacol 2013; 272(2): 313-24.
Saeidnia S, Manayi A, Gohari AR, Abdollahi M. The story of beta-sitosterol-a review. Eur J Med Plants 2014; 4(5): 590-609.
Pumpkin Patel S. (Cucurbita sp.) seeds as a nutraceutic: a review on status quo and scopes. Med J Nutr Metab 2013; http://dx.doi.org/10.3233/s12349-013-0131-5.
Matkowski A, Kus P, G´oralska E, Wozniak D. Mangiferin-a bioactive xanthonoid, not only from mango and not just antioxidant. Mini Rev Med Chem 2013; 13(3): 439-55.
Sellamuthu PS, Arulselvan P, Kamalraj S, Fakurazi S, Kandasamy M. Protective nature of Mangifera on oxidative stress and antioxidant status in tissues of streptozotocin-induced diabetic rats. ISRN Pharmacol 2013; http://dx.doi.org/10.1155/2013/750109.
Chahar MK, Sharma N, Dobhal MP, Joshi YC. Flavonoids: a versatile source of anticancer drugs. Pharmacogn Rev 2011; 5(9):1-12.
Çitoglu GS, Acikara O¨ B. Column chromatography for terpenoids an flavonoids. In: Dhanarasu S, editor. Chromatography and its applications. Rijeka: Intech; 2012.
House JE. Inorganic chemistry. Massachusetts: Academic Press; 2008.
Gupta A, Naraniwal M, Kothari V. Modern extraction methods for preparation of bioactive plant extracts. Int J Appl Nat Sci 2012;1(1): 8-26.
Lipinski, C.A., Lombardo, F., Dominy, B.W. & Feeney, P.J., Experimental and Computational Approaches to Estimate Solubility and Permeability in Drug Discovery and Development Settings, Adv. Drug Deliv. Rev., 23(1-3), pp. 3-26, 1997
Pires, D.E., Blundell, T.L. & Ascher, D.B., pkCSM: Predicting Smallmolecule Pharmacokinetic and Toxicity Properties using Graph-based Signatures, J. Med. Chem., 58(9) pp. 4066-4072, 2015. DOI:10.1021/ acs.jmedchem.5b00104
Bikadi Z, Hazai E. Application of the PM6 semi-empirical method to modeling proteins enhances docking accuracy of AutoDock. J Cheminform 2009; 1: 15.
Utomo DH, Widodo N, Rifa’i M. Identifications small molecules inhibitor of p53-mortalin complex for cancer drug using virtual screening. Bioinformation 2012; 8: 426-9.
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