Analisis Hubungan Kuantitatif Struktur-Aktivitas (HKSA) dari Senyawa Aktif Antimalaria Diterpen Kassan Hasil Isolasi dari Biji Bagore (Caesalpinia crista Linn.) dengan Parameter Elektronik

Authors

  • Islamudin Ahmad Kelompok Bidang Ilmu Kimia Medisinal, Fakultas Farmasi Universitas Mulawarman, Samarinda Author
  • Gemini Alam Laboratorium Farmakognosi-Fitokimia, Fakultas Farmasi Universitas Hasanuddin Author

Keywords:

QSAR, Atomic Net Charge, Cross Validation Methods

Abstract

Quantitative Structure-Activity Relationship (QSAR) study have been conducted to  antimalarial active compounds of cassane-type diterpenes isolated from seed kernels of Bagore (Caesalpinia crista Linn.), using the atomic net charges data resulted from AM1 method of semi-empirical calculations. The aim of this research is to determine the mathematic equation model of quantitative structure-activity relationship from antimalarial active compounds of cassane-type diterpenes isolated from seed kernels of Bagore (Caesalpinia crista Linn.) using the electronic parameter of AM1 method. The best QSAR equation model was determined by multiple linier regression analysis and tested by leave-one-out type of cross validation methods. The result indicates that the biological activity is represented by a linier function of activity versus atomic net charges of C1,  C2, C3, C4, and C6 which is expressed by :

Log (1/C) = -7,362(+ 4,251) qC1 +3,258 (+ 4,590) qC2 + 11,038 (+4,485) qC3 + 29,421  (+20,542) qC4 + 19,849 (+6,171) qC6 + 8,541 (+2,256)

The equation is significant at 95% level. The cross validation analysis give minimal value of PRESS=64,372 and SEP = 2,93; where Log (1/IC50) = biological activity and q = atomic net charges

References

._______. 1996, HyperCheme®Release 7.5 for Windows, Hypercube Inc; Canada

Aswad, M. 2006, â€Prediksi Aktivitas Biologis Senyawa Baru dengan Metode Kimia Komputasiâ€, Majalah Farmasi dan Farmakologi, Vol. 10 no. 1 Maret (hal. 17 – 23)

Bevan, R.; & David. 2002, “QSAR And Drug Designâ€, NetworkScience,http://www.netsci.org/Science/Compchem/feature12.html

Dewar, M.J.S.; Zoebish E.G.; Healy E.F.; & Stewart J.J.P. 1985, AM 1 : A New General Purpose Quantrum Mechanical Molecular Model, J. Am. Chem. Soc., vol 107

Franke, R. 1984, Theoretical Drug Design Methods, Elsevier, Amsterdam

Istyastono, E.P.; & Martono, S.; 2005, Hubungan Kuantitatif Struktur – Aktivitas Kurkumin dan Turunannya sebagai Inhibitor GST Kelas , Majalah Farmasi Indonesia. 16(4), 204 – 213

Kalauni, S.K.; Awale, S.; Tezuka, Y.; Banskota, A.H.; Linn T.Z.; Asih, P.B.S.; Tanaka, K.; Kadota, S.; & Syafruddin, D. 2005, Antimalarial Activity of Cassane and Norcassane type Diterpenes from Caesalpinia crista and Their Structure-Activity Relationship.J. Natural Product.

Karelson, M.; Lobanov, V.S.; & Katrizky, A.R. 1996,Quantum-Chemical Descriptors in QSAR/QSPR Studies, Chem. Rev., 96, 1027-1043

Khadikar, P.V.; Karmarkar, S.; & Agrawal, V.K. 1996, Quantum–Chemical De-scriptors in QSAR/QSPR Studies, J. Chem. Inf. Comput. Sci., 41, 934 – 949

Kubinyi, H. 1993, QSAR; Hansch Analysis and Related Approaches, VCH Verlagsgesellschaft, Weinheim

Labute, P. 2006, A New Technology For HTS And UHTS Data Analysis, Binary QSAR, http://www.netsci.org/Science/Compchem/feature9.html

Linn, T.Z.; Awale, S.; Tezuka, Y.; Banskota, A.,H.; Kalauni, S.K.; Attamimi, F.; Ueda, J.; Asih, P.B.S.; Tanaka, K.; & Kadota, S., 2005, Cassane and Norcassane Type DiTerpenes from Caesalpinia cristaof Indenesia and Their Antimalarial Activity against the Growth of Plasmodium falciparum. J. Natural Product, 68, 706 – 710

Richon, B.; & Allen, 1997, An Introduction to QSAR Methodology, Network Science, http://www.netsci.org/Science/Compchem/feature11.html. 14.Tahir, I. 2000, Hubungan Kuantitatif Struktur Elektronik–Aktivitas Senyawa Turunan N,N–Dimetil–2–Bromo Fenil Etil Amina Menggunakan Metoda Validasi Silang, Tesis, Program Pascasarjana Universitas Gadja Mada; Yogyakarta

Sardjoko. 1993, Rancangan Obat, Gadjah Mada University Press; Yogyakarta

Sembiring, R.K. 1995, Analisis Regresi, Penerbit Institut Teknologi Bandung; Bandung

Seydel, J.K. 1990, Summary Lecture Course QSAR, Mid Career Training in Pharmacochemistry, Fakultas Farmasi UGM, Yogyakarta

Siswandono, 1995, Kimia Medisinal, Airlangga University Press; Surabaya

Widiyantoro, P., 1997, Hubungan Kuantitatif Antara Struktur-Aktivitas pada N,N-Dimetil-2-Bromo-Fenelitamin Tersubstitusi menggunakan metode semiempiris PM3, FMIPA UGM, Yogyakarta

Downloads

Published

2025-02-01

How to Cite

Analisis Hubungan Kuantitatif Struktur-Aktivitas (HKSA) dari Senyawa Aktif Antimalaria Diterpen Kassan Hasil Isolasi dari Biji Bagore (Caesalpinia crista Linn.) dengan Parameter Elektronik. (2025). Journal of Tropical Pharmacy and Chemistry , 1(2), 116–124. https://jtpc.ff.unmul.ac.id/index.php/jtpc/article/view/133

Most read articles by the same author(s)